How BLAST works - pictorial
Methodologies and Computation
- Methodologies and Computation - Contents
- The first step
- Databases
- Purpose of databases
- Example of a database: GenBank
- Finding databases
- Using databases
- Databases are dynamic and variable
- Tools for using databases
- Phred and Phrap
- FastA
- Sequence retrieval
- Sequence alignment
- BLAST
- How BLAST works
- How BLAST works - pictorial
- Interpreting BLAST output
- BLAST parameters
- The BLAST suite
- Large scale computational genomics
- BAC end sequencing and methyl-filtration libraries
- Use of C0t analysis
- ESTs
- EST production pictorial
- Use of ESTs
- Available ESTs
- Limitations of ESTs
- Finding genes
- Gene function
- The study of gene expression
- Gene expression analysis
- Microarrays
- Use of microarrays
- Limitations of microarrays
- Resources & additional information
Sections:
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