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Glossary
References
Sections:
Marker-assisted Breeding
Selection of Markers
Genetic Diversity
Tips for Phenotyping
Aspects related to marker-assisted breeding
Naming your traits
Ontology
Ontologies Available
Defining your trait
Experimental Design: Replication
Experimental Design: Randomisation
Experimental Design: Example
Eliminating bias: scoring blind
Phenotyping Assays: Ways of measuring
Kinds of data: Categorical
Categorical data, contd.
Continuous data
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Special issues in phenotyping for MAB:
Data files
Phenotype and marker data
Data checking functions
Resources
Genetic Linkage Mapping
Quantitative Trait Analysis
Applications & Future Directions
Resources
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Untitled Document
Special issues in phenotyping for
MAB:
•Don’t guess! It is better to have missing data than wrong data
•A missing data point is not the same as a score of 0
ex. Yield: a score of 0 grams is much worse than an unknown yield.