Integrated breeding platform - Plant breeding software

GCP Product Catalogue

The Product Catalogue is an evolving  compilation of  a diverse array of  products derived from tangible outputs of projects supported in whole or in part by the CGIAR Generation Challenge Programme.  As projects mature, more products are added. Products are listed under the specific project crop or ‘Global’.   Under each crop, you will find diverse types of products, such as  germplasm, markers, genomics resources and informatics applications.  ‘Global’ includes products  applicable to several or all crops and generally includes informatics tools and learning materials. We consider all catalogued products as useful. However, our user base is highly varied and includes upstream as well as downstream plant scientists. Not all products will be of direct interest to breeders. Consequently, a BUL (Breeding Use Level) rating has been provided to indicate the direct usefulness of products to breeders:

Breeding Use Levels
BUL Description
1  Ready to use for breeding
 (I.e. predictive markers, germplasm of acceptable agronomic type containing a well-defined and characterized trait, and etc.).
2  Qualified use for breeding
 (i.e germplasm in which trait genetics have not been well defined or markers that may be informative but not necessarily predictive).
3  Indirectly useful for breeding
 (i.e. genomic resources from which downstream products for breeding are developed and many informatics applications).
4  Not developed for breeding, per se
 (i.e. miscellaneous information as socio-economic reports).


How to use this table:

  • With the exception of BUL, you can sort by column by clicking on the title of each column
  • You can search for any term, word, or keyword by typing it into the search box above the table
  • You can export data by clicking on the CSV link above the table
     

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Product Number G4008.07
Product Genomic tools for pearl millet
Crop/Area Pearl Millet
Type Genomic resources
Description 1) A set of nearly 400,000 short-sequence pearl millet ESTs from drought-stressed root and shoot libraries of a pair of elite, genetically diverse pearl millet inbreds developed and mined for EST-SSRs and SNPs. 2) A set of 136 pearl millet EST-SSR primer pairs were developed capable of producing scorable amplification products using a touch-down PCR protocol. 3) Moderately-well saturated SSR-based genetic linkage maps of three pearl millet RIL populations merged with a partially saturated SSR-based genetic linkage map for a fourth pearl millet RIL population to provide a pearl millet consensus linkage map comprised of 174 markers.
Current Use Genetic mapping studies for pearl millet
Access Data sets available on-line contigs: http://gcpcr.grinfo.net/files/cr_files/gcpcr_file1016.xlsx singletons: http://gcpcr.grinfo.net/files/cr_files/gcpcr_file1017.xlsx SSR markers: http://gcpcr.grinfo.net/files/cr_files/gcpcr_file1021.xlsx
UL 3