Integrated breeding platform - Plant breeding software

GCP Product Catalogue

The Product Catalogue is an evolving  compilation of  a diverse array of  products derived from tangible outputs of projects supported in whole or in part by the CGIAR Generation Challenge Programme.  As projects mature, more products are added. Products are listed under the specific project crop or ‘Global’.   Under each crop, you will find diverse types of products, such as  germplasm, markers, genomics resources and informatics applications.  ‘Global’ includes products  applicable to several or all crops and generally includes informatics tools and learning materials. We consider all catalogued products as useful. However, our user base is highly varied and includes upstream as well as downstream plant scientists. Not all products will be of direct interest to breeders. Consequently, a BUL (Breeding Use Level) rating has been provided to indicate the direct usefulness of products to breeders:

Breeding Use Levels
BUL Description
1  Ready to use for breeding
 (I.e. predictive markers, germplasm of acceptable agronomic type containing a well-defined and characterized trait, and etc.).
2  Qualified use for breeding
 (i.e germplasm in which trait genetics have not been well defined or markers that may be informative but not necessarily predictive).
3  Indirectly useful for breeding
 (i.e. genomic resources from which downstream products for breeding are developed and many informatics applications).
4  Not developed for breeding, per se
 (i.e. miscellaneous information as socio-economic reports).


How to use this table:

  • With the exception of BUL, you can sort by column by clicking on the title of each column
  • You can search for any term, word, or keyword by typing it into the search box above the table
  • You can export data by clicking on the CSV link above the table
     

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Product Number G4005.18
Product A laboratory manual for use of low-cost, low tech genotyping for rice breeding programs
Crop/Area Rice
Type Publication
Description A laboratory manual developed for low-cost, low tech and low cost, high throughput technologies for breeders or researchers interested in applying these technologies for marker assisted selection. Filter-based and microtiter plate-based technologies adapted for rice and maize breeding programs are described for the detection of allele-specific gene-based markers.
Current Use Low cost, high-throughput genotyping for marker assisted selection breeding programs of institutions and small to medium private enterprises in developing countries
Access Contact: Casiana (Nollie) M. Vera Cruz, IRRI c.veracruz@cgiar.org Manual URL: Vera Cruz C.M., Reveche M.Y.V., Mercado E.F.L., Chen J., Skinner D.J., Bernardo M., Chin J.H., Collard B.C.Y. 2007. Laboratory Manual on Low cost gene-based technologies for MAS application in rice and maize. Workshop on Low-cost gene-based technologies for MAS application in rice and maize. Barwale Knowledge and Study Center Jalna, Maharashtra, India, 25 – 27 April 2007 (https://drive.google.com/folderview?id=0B6lvQS20MYoAR0JJaGd6d0lJQ3c&usp=sharing) Associated reference: Collard, B.C.Y., Vera Cruz, C.M., McNally, K.L., Virk, P.S., and Mackill, D.J. 2008. Rice molecular breeding laboratories in the genomics era: current status and future considerations. International Journal of Plant Genomics, 2008:524847. Doi:10.1155/2008/524847 (http://www.hindawi.com/journals/ijpg/2008/524847/abs/)
UL 3