Integrated breeding platform - Plant breeding software

GCP Product Catalogue

The Product Catalogue is an evolving  compilation of  a diverse array of  products derived from tangible outputs of projects supported in whole or in part by the CGIAR Generation Challenge Programme.  As projects mature, more products are added. Products are listed under the specific project crop or ‘Global’.   Under each crop, you will find diverse types of products, such as  germplasm, markers, genomics resources and informatics applications.  ‘Global’ includes products  applicable to several or all crops and generally includes informatics tools and learning materials. We consider all catalogued products as useful. However, our user base is highly varied and includes upstream as well as downstream plant scientists. Not all products will be of direct interest to breeders. Consequently, a BUL (Breeding Use Level) rating has been provided to indicate the direct usefulness of products to breeders:

Breeding Use Levels
BUL Description
1  Ready to use for breeding
 (I.e. predictive markers, germplasm of acceptable agronomic type containing a well-defined and characterized trait, and etc.).
2  Qualified use for breeding
 (i.e germplasm in which trait genetics have not been well defined or markers that may be informative but not necessarily predictive).
3  Indirectly useful for breeding
 (i.e. genomic resources from which downstream products for breeding are developed and many informatics applications).
4  Not developed for breeding, per se
 (i.e. miscellaneous information as socio-economic reports).


How to use this table:

  • With the exception of BUL, you can sort by column by clicking on the title of each column
  • You can search for any term, word, or keyword by typing it into the search box above the table
  • You can export data by clicking on the CSV link above the table
     

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Product Number G3005.05
Product An analysis of genome synteny of Arachis with other legumes
Crop/Area Groundnuts
Type Genomic Resources
Description A genome synteny of Arachis analysed with L. japonicus, M. tuncatula and common bean derived from an analysis based on more than 100 genic markers.
Current Use Genetic studies of groundnut and its relationship to other legumes for drought tolerance.
Access Analysis results available through a published study. Contact: José Valls, EMBRAPA, Brazil or David Bertioli, Universidade Catolica de Brasilia, Brazil or Jens Stougaard, Univesity of Aahus, Denmark valls@cenargen.embrapa.br davidbertioli@unb.br stougaard@mb.au.dk Hougaard BK, Madsen LH, Sandal N, Moretzsohn MC, Fredslund J, Schauser L, Nielsen AM, Rohde T, Sato S, Tabata S, Bertioli DJ, Stougaard J. (2008) Legume anchor markers link syntenic regions between Phaseolus vulgaris, Lotus japonicus, Medicago truncatula and Arachis. Genetics 179: 2299–2312. Bertioli D, Moretzsohn M, Madsen LH, Sandal N, Leal-Bertioli S, Guimarães P, Hougaard BK, Fredslund J, Schauser L, Nielsen AM, Sato S, Tabata S, Cannon S, Stougaard J. (2009) An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes. BMC Genomics, 10:45
UL 3